collectin sub-family member 11

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Synonym

MGC129470, MGC129471, 1010001H16Rik, collectin sub-family member 11, Colec11

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:1.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:29.60 bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:0 cerebellum:- brain stem:0.20 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:0 retina:- eye:- artery/aorta:1.24 vein:- lymphnode:1.03 peripheral blood:- spleen:0 thymus:0.49 bone marrow:- adipose:- bone:0.63 skin:0.91
RNA-seq cerebrum:1.27 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:7.40 heart:55.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:36.20        lung:-    bladder:- kidney:8.10 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:0.31 placenta:0.77 prostate:0.20 ovary:1.81 testis:0 heart:- muscle:- esophagus:- stomach:0 intestine:0 colon:0     liver/hepato:4.29    lung:0.55 bladder:1.41 kidney:- pituitary:0 thyroid/parathyroid:- adrenal gland:1.87 pancreas:0 breast:0.50 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.04 esophagus:- stomach:- intestine:- colon:-     liver/hepato:5.89        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_027866
Gene ID 71693
Unigene ID Mm.30724
Probe set ID -
Ensembl ID ENSMUSG00000036655

Orthologous Gene

Human[2]  NM_024027, NM_199235
Rat[2]  NM_024027, NM_199235

Chromosomal Region

12A2  [29,279,038  -  29,308,155]

Gene Family (Interpro ID)

IPR001304  C-type lectin
IPR016187  C-type lectin fold
IPR016186  C-type lectin-like

Link to Pubmed  (Pubmed ID)

10349636
11042159
11076861
11217851
12466851
12477932
16141072
16141073
18040075
20562862
21258343

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0007275  multicellular organismal development

Cellular Component

GO:0005575  cellular_component
GO:0005581  collagen
GO:0005576  extracellular region

Molecular Function

GO:0030246  carbohydrate binding
GO:0005537  mannose binding