rhomboid domain containing 1

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Synonym

Rhbdd1, MGC7809, rhomboid domain containing 1, 4930418P06Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:26 cerebellum:36.80 brain stem:127.10 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:7.60 artery/aorta:- vein:- lymphnode:21.60 peripheral blood:14.40 spleen:65.80 thymus:19.80 bone marrow:- adipose:- bone:75.10 skin:110.80
GeneChip cerebrum:6.34 cerebellum:6.80 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:7.60 spine:7.26 retina:6.72 eye:7.27 artery/aorta:- vein:7.19 lymphnode:7.82 peripheral blood:- spleen:7.19 thymus:- bone marrow:7.61 adipose:7.93 bone:7.64 skin:7.73
CAGE cerebrum:2.56 cerebellum:- brain stem:2.61 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.11 retina:- eye:- artery/aorta:3.47 vein:- lymphnode:3.37 peripheral blood:- spleen:3.14 thymus:2.95 bone marrow:- adipose:- bone:3.02 skin:2.91
RNA-seq cerebrum:1.91 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:43.60 placenta:13.80 prostate:- ovary:23 testis:140.40 heart:93 muscle:71 esophagus:- stomach:- intestine:- colon:70.50     liver/hepato:9.10        lung:120.50    bladder:66.20 kidney:16.10 pituitary:12.90 thyroid/parathyroid:- adrenal gland:- pancreas:28.10 breast:94.70 salivary:-
GeneChip uterus:7.99 placenta:8.28 prostate:8.89 ovary:7.97 testis:7.68 heart:7.57 muscle:7.52 esophagus:- stomach:8.38 intestine:7.97 colon:- liver/hepato:8.64 lung:8.38 bladder:8.64 kidney:7.65 pituitary:7.16 thyroid/parathyroid:- adrenal gland:8.31 pancreas:8.36 breast:7.86 salivary:8.54
CAGE uterus:3.17 placenta:3.35 prostate:4.00 ovary:3.43 testis:5.54 heart:- muscle:- esophagus:- stomach:3.32 intestine:2.93 colon:3.30     liver/hepato:3.15    lung:3.61 bladder:3.75 kidney:- pituitary:2.89 thyroid/parathyroid:- adrenal gland:3.59 pancreas:3.45 breast:3.08 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:2.49 esophagus:- stomach:- intestine:- colon:-     liver/hepato:2.61        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001122685
Gene ID 76867
Unigene ID Mm.226994
Probe set ID 1423918_at  [Mouse430_2]
Ensembl ID ENSMUSG00000026142

Orthologous Gene

Human[2]  NM_001167608, NM_032276
Rat[1]  NM_001024891, NM_032276

Chromosomal Region

1C5  [82,313,027  -  82,441,941]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
10349636
11042159
11076861
11217851
12466851
12477932
12904583
14610273
15489334
16141072
16141073
18953687
19358743
21677750
22624035
22795130

Gene Ontology  (GO ID)

Biological Process

GO:0006915  apoptosis
GO:0030154  cell differentiation
GO:0034620  cellular response to unfolded protein
GO:0034644  cellular response to UV
GO:0030433  ER-associated protein catabolic process
GO:0031293  membrane protein intracellular domain proteolysis
GO:0033619  membrane protein proteolysis
GO:0043066  negative regulation of apoptosis
GO:0045732  positive regulation of protein catabolic process
GO:0010954  positive regulation of protein maturation by peptide bond cleavage
GO:0051047  positive regulation of secretion
GO:0043687  post-translational protein modification
GO:0006508  proteolysis
GO:0048515  spermatid differentiation
GO:0007283  spermatogenesis

Cellular Component

GO:0005783  endoplasmic reticulum
GO:0005789  endoplasmic reticulum membrane
GO:0030176  integral to endoplasmic reticulum membrane
GO:0016021  integral to membrane
GO:0016020  membrane
GO:0005739  mitochondrion

Molecular Function

GO:0004175  endopeptidase activity
GO:0016787  hydrolase activity
GO:0008233  peptidase activity
GO:0005515  protein binding
GO:0004252  serine-type endopeptidase activity
GO:0008236  serine-type peptidase activity