beta globin minor gene

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:47.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:35.50 artery/aorta:714.30 vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:- bone:117.10 skin:470.80
GeneChip cerebrum:10.90 cerebellum:11.70 brain stem:10.07 corpus callosum/glia:- pineal gland:- peripheral nerve:11.45 spine:- retina:- eye:8.83 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:12.81 thymus:12.18 bone marrow:13.41 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:119.50 prostate:- ovary:- testis:- heart:562.30 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:625        lung:-    bladder:- kidney:63.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:56.90 breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:12.73 muscle:11.78 esophagus:- stomach:- intestine:11.37 colon:11.83 liver/hepato:- lung:- bladder:- kidney:12.87 pituitary:12.14 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001113223
Gene ID 100134871
Unigene ID Rn.216394
Probe set ID rc_AI179576_s_at  [RG_U34A]
Ensembl ID ENSRNOG00000033465

Orthologous Gene

Human[4]  NM_000519, NM_000518
Mouse[3]  NM_001201391, NM_008220, NM_016956, NM_001127686

Chromosomal Region

1q32  [161,578,128  -  161,579,492]
1q32  [161,584,858  -  161,620,198]

Gene Family (Interpro ID)

IPR012292  Globin
IPR013314  Globin, lamprey/hagfish type
IPR000971  Globin, subset
IPR009050  Globin-like
IPR002338  Haemoglobin, alpha
IPR002337  Haemoglobin, beta
IPR002339  Haemoglobin, pi
IPR001032  Leghaemoglobin
IPR002335  Myoglobin

Link to Pubmed  (Pubmed ID)

2263193
2587229
2748344
3357786
3453111
15632090

Gene Ontology  (GO ID)

Biological Process

GO:0048821  erythrocyte development
GO:0030097  hemopoiesis
GO:0042744  hydrogen peroxide catabolic process
GO:0015671  oxygen transport
GO:0010942  positive regulation of cell death
GO:0051291  protein heterooligomerization
GO:0010999  regulation of eIF2 alpha phosphorylation by heme
GO:0070293  renal absorption
GO:0042542  response to hydrogen peroxide

Cellular Component

GO:0031838  haptoglobin-hemoglobin complex
GO:0005833  hemoglobin complex

Molecular Function

GO:0031720  haptoglobin binding
GO:0020037  heme binding
GO:0030492  hemoglobin binding
GO:0005506  iron ion binding
GO:0019825  oxygen binding
GO:0005344  oxygen transporter activity
GO:0004601  peroxidase activity