integrin, alpha 6

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:119.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:35.50 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:- bone:39 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:113.90 ovary:- testis:- heart:77.60 muscle:- esophagus:- stomach:- intestine:104.70 colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID XM_001059408
Gene ID 114517
Unigene ID Rn.161799
Probe set ID -
Ensembl ID -

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

3q22  [54,203,296  -  54,272,575]

Gene Family (Interpro ID)

IPR013517  FG-GAP
IPR013519  Integrin alpha beta-propellor

Link to Pubmed  (Pubmed ID)

8889548
9185503
12060780
12297042
13130099
15466886
16436605
16557522
16608848
17161391
17543136
18333785
21237282

Gene Ontology  (GO ID)

Biological Process

GO:0050873  brown fat cell differentiation
GO:0033627  cell adhesion mediated by integrin
GO:0016337  cell-cell adhesion
GO:0007160  cell-matrix adhesion
GO:0031668  cellular response to extracellular stimulus
GO:0071407  cellular response to organic cyclic substance
GO:0046847  filopodium assembly
GO:0007229  integrin-mediated signaling pathway
GO:0050900  leukocyte migration
GO:0042475  odontogenesis of dentine-containing tooth
GO:0043065  positive regulation of apoptosis
GO:0022409  positive regulation of cell-cell adhesion
GO:0010811  positive regulation of cell-substrate adhesion
GO:0042327  positive regulation of phosphorylation
GO:0045944  positive regulation of transcription from RNA polymerase II promoter

Cellular Component

GO:0034676  alpha6-beta4 integrin complex
GO:0045178  basal part of cell
GO:0009925  basal plasma membrane
GO:0005604  basement membrane
GO:0016323  basolateral plasma membrane
GO:0009986  cell surface
GO:0005913  cell-cell adherens junction
GO:0009897  external side of plasma membrane
GO:0030175  filopodium
GO:0030056  hemidesmosome
GO:0008305  integrin complex
GO:0005886  plasma membrane

Molecular Function

GO:0005178  integrin binding
GO:0043236  laminin binding
GO:0032403  protein complex binding