splicing factor 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:47.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:73.70 spine:- retina:- eye:142.20 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:195.20 skin:-
GeneChip cerebrum:6.24 cerebellum:6.41 brain stem:6.42 corpus callosum/glia:- pineal gland:- peripheral nerve:6.16 spine:- retina:- eye:6.29 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:6.19 thymus:5.97 bone marrow:6.89 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:19.40 muscle:- esophagus:- stomach:- intestine:104.70 colon:-     liver/hepato:106.40        lung:50.70    bladder:- kidney:63.80 pituitary:296.10 thyroid/parathyroid:- adrenal gland:- pancreas:56.90 breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:6.19 muscle:6.16 esophagus:- stomach:- intestine:6.20 colon:5.79 liver/hepato:- lung:- bladder:- kidney:6.20 pituitary:6.14 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001110793
Gene ID 117855
Unigene ID Rn.107400
Probe set ID AF079873_at  [RG_U34A]
Ensembl ID ENSRNOG00000021085

Orthologous Gene

Human[8]  NM_001178030, NM_001178031, NM_004630, NM_201995, NM_201997, NM_201998
Mouse[5]  NM_001110791, NM_011750, NM_004630, NM_201995, NM_201997, NM_201998

Chromosomal Region

1q43  [209,146,177  -  209,159,455]

Gene Family (Interpro ID)

IPR004087  K Homology
IPR004088  K Homology, type 1
IPR018111  K Homology, type 1, subgroup
IPR003070  Orphan nuclear receptor
IPR003072  Orphan nuclear receptor, NOR1 type
IPR001723  Steroid hormone receptor
IPR001878  Zinc finger, CCHC-type

Link to Pubmed  (Pubmed ID)

8889548
10103072
11748220
12477932
14988433

Gene Ontology  (GO ID)

Biological Process

GO:0006917  induction of apoptosis
GO:0033327  Leydig cell differentiation
GO:0030238  male sex determination
GO:0048662  negative regulation of smooth muscle cell proliferation
GO:0050810  regulation of steroid biosynthetic process

Cellular Component

GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005681  spliceosomal complex

Molecular Function

GO:0003723  RNA binding
GO:0008270  zinc ion binding