matrix metallopeptidase 13

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Synonym

normal 40 tissues
data not exists

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:23.90

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:234.30

skin:470.80

GeneChip

cerebrum:4.51

cerebellum:4.30

brain stem:4.34

corpus callosum/glia:-

pineal gland:-

peripheral nerve:4.43

spine:-

retina:-

eye:4.92

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:4.56

thymus:4.60

bone marrow:7.36

adipose:-

bone:-

skin:-

CAGE

nodata

RNA-seq

nodata

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:4.36

muscle:4.41

esophagus:-

stomach:-

intestine:4.59

colon:4.47

liver/hepato:-

lung:-

bladder:-

kidney:4.45

pituitary:4.51

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

CAGE

nodata

RNA-seq

nodata

IDs

Refseq ID	NM_133530
Gene ID	171052
Unigene ID	Rn.10997
Probe set ID	M60616_at [RG_U34A]
Ensembl ID	ENSRNOG00000008478

Orthologous Gene

Human[1]	NM_002427
Mouse[1]	NM_008607

Chromosomal Region

8q11 [4,158,887 - 4,169,166]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001506	Peptidase M12A, astacin
IPR006026	Peptidase, metallopeptidases

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0030282	bone mineralization
GO:0051216	cartilage development
GO:0044267	cellular protein metabolic process
GO:0030574	collagen catabolic process
GO:0035116	embryonic hindlimb morphogenesis
GO:0001554	luteolysis
GO:0001503	ossification
GO:0043171	peptide catabolic process
GO:0006508	proteolysis
GO:0031623	receptor internalization
GO:0042493	response to drug
GO:0043627	response to estrogen stimulus
GO:0001666	response to hypoxia
GO:0009612	response to mechanical stimulus

Cellular Component

GO:0031012	extracellular matrix
GO:0005615	extracellular space
GO:0005583	fibrillar collagen
GO:0005794	Golgi apparatus
GO:0046581	intercellular canaliculus
GO:0005764	lysosome
GO:0005578	proteinaceous extracellular matrix

Molecular Function

GO:0005509	calcium ion binding
GO:0048306	calcium-dependent protein binding
GO:0001968	fibronectin binding
GO:0050750	low-density lipoprotein receptor binding
GO:0004222	metalloendopeptidase activity
GO:0008233	peptidase activity
GO:0008270	zinc ion binding

matrix metallopeptidase 13

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function