X-ray repair complementing defective repair in Chinese hamster cells 6

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:35.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:71.10 artery/aorta:357.10 vein:- lymphnode:- peripheral blood:- spleen:- thymus:122.90 bone marrow:- adipose:- bone:39 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:113.90 ovary:- testis:82.30 heart:38.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:13.30        lung:-    bladder:- kidney:- pituitary:177.70 thyroid/parathyroid:- adrenal gland:6535.90 pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_139080
Gene ID 25019
Unigene ID Rn.161996
Probe set ID -
Ensembl ID ENSRNOG00000006392

Orthologous Gene

Human[1]  NM_001469
Mouse[1]  NM_010247

Chromosomal Region

7q34  [120,401,944  -  120,422,923]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1639139
9674610
11175667
11966321
12477932
14576192
18162465
18378183
19121380
19723106
20192759
22019940

Gene Ontology  (GO ID)

Biological Process

GO:0007420  brain development
GO:0071475  cellular hyperosmotic salinity response
GO:0071481  cellular response to X-ray
GO:0006302  double-strand break repair
GO:0006303  double-strand break repair via nonhomologous end joining
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0050769  positive regulation of neurogenesis
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0006974  response to DNA damage stimulus
GO:0010212  response to ionizing radiation
GO:0000723  telomere maintenance
GO:0033151  V(D)J recombination

Cellular Component

GO:0005737  cytoplasm
GO:0043564  Ku70:Ku80 complex
GO:0070419  nonhomologous end joining complex
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0043234  protein complex
GO:0005667  transcription factor complex

Molecular Function

GO:0051575  5'-deoxyribose-5-phosphate lyase activity
GO:0004003  ATP-dependent DNA helicase activity
GO:0003684  damaged DNA binding
GO:0044212  DNA regulatory region binding
GO:0003690  double-stranded DNA binding
GO:0003691  double-stranded telomeric DNA binding
GO:0005515  protein binding
GO:0008022  protein C-terminus binding
GO:0042162  telomeric DNA binding