nuclear receptor subfamily 1, group D, member 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:7.42 cerebellum:7.47 brain stem:7.37 corpus callosum/glia:- pineal gland:- peripheral nerve:7.27 spine:- retina:- eye:8.72 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:7.04 thymus:6.71 bone marrow:6.90 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:38 ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.11 muscle:7.13 esophagus:- stomach:- intestine:7.05 colon:7.36 liver/hepato:- lung:- bladder:- kidney:7.09 pituitary:7.11 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001113422
Gene ID 252917
Unigene ID Rn.219001
Probe set ID M25804_at  [RG_U34A]
Ensembl ID ENSRNOG00000009329

Orthologous Gene

Human[2]  NM_021724
Mouse[1]  NM_145434

Chromosomal Region

10q31  [87,541,246  -  87,547,976]

Gene Family (Interpro ID)

IPR003070  Orphan nuclear receptor
IPR003074  Peroxisome proliferator-activated receptor
IPR000003  Retinoid X receptor
IPR001723  Steroid hormone receptor
IPR013088  Zinc finger, NHR/GATA-type
IPR001628  Zinc finger, nuclear hormone receptor-type

Link to Pubmed  (Pubmed ID)

2542765
12477932
12821652
18946026
20424134
21952132
22425774
23637135

Gene Ontology  (GO ID)

Biological Process

GO:0071222  cellular response to lipopolysaccharide
GO:0007623  circadian rhythm
GO:0010871  negative regulation of receptor biosynthetic process
GO:0034144  negative regulation of toll-like receptor 4 signaling pathway
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0000790  nuclear chromatin
GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0044212  DNA regulatory region binding
GO:0043565  sequence-specific DNA binding
GO:0003707  steroid hormone receptor activity
GO:0003700  transcription factor activity
GO:0008270  zinc ion binding