high mobility group box 1

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Synonym

normal 40 tissues
data not exists

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:12

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:7.65

cerebellum:7.81

brain stem:6.96

corpus callosum/glia:-

pineal gland:-

peripheral nerve:7.64

spine:-

retina:-

eye:7.69

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:8.48

thymus:9.88

bone marrow:8.92

adipose:-

bone:-

skin:-

CAGE

nodata

RNA-seq

nodata

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:114.10

testis:-

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:7.87

muscle:7.83

esophagus:-

stomach:-

intestine:8.42

colon:8.37

liver/hepato:-

lung:-

bladder:-

kidney:8.09

pituitary:8.03

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

CAGE

nodata

RNA-seq

nodata

IDs

Refseq ID	NM_012963
Gene ID	25459
Unigene ID	Rn.144565
Probe set ID	M64986_g_at [RG_U34A]
Ensembl ID	ENSRNOG00000038953

Orthologous Gene

Human [0]
Mouse [0]

Chromosomal Region

1q51 [228,589,682 - 228,590,329]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000910	High mobility group, HMG1/HMG2
IPR000135	High mobility group, HMG1/HMG2, subgroup
IPR009071	High mobility group, superfamily

Gene Ontology (GO ID)

Biological Process

GO:0031532	actin cytoskeleton reorganization
GO:0000902	cell morphogenesis
GO:0071347	cellular response to interleukin-1
GO:0006935	chemotaxis
GO:0007623	circadian rhythm
GO:0032392	DNA geometric change
GO:0050930	induction of positive chemotaxis
GO:0050831	male-specific defense response to bacterium
GO:0051450	myoblast proliferation
GO:0008156	negative regulation of DNA replication
GO:0007399	nervous system development
GO:0031175	neuron projection development
GO:0043065	positive regulation of apoptosis
GO:0010942	positive regulation of cell death
GO:0030335	positive regulation of cell migration
GO:0008284	positive regulation of cell proliferation
GO:0002053	positive regulation of mesenchymal cell proliferation
GO:0045931	positive regulation of mitotic cell cycle
GO:0033034	positive regulation of myeloid cell apoptosis
GO:0045663	positive regulation of myoblast differentiation
GO:0010976	positive regulation of neuron projection development
GO:0014911	positive regulation of smooth muscle cell migration
GO:0050727	regulation of inflammatory response
GO:0042493	response to drug
GO:0009749	response to glucose stimulus
GO:0009408	response to heat
GO:0032868	response to insulin stimulus
GO:0034341	response to interferon-gamma
GO:0032496	response to lipopolysaccharide

Cellular Component

GO:0005694	chromosome
GO:0005737	cytoplasm
GO:0005615	extracellular space
GO:0005634	nucleus

Molecular Function

GO:0008097	5S rRNA binding
GO:0003681	bent DNA binding
GO:0000402	crossed form four-way junction DNA binding
GO:0005125	cytokine activity
GO:0008301	DNA bending activity
GO:0003677	DNA binding
GO:0003690	double-stranded DNA binding
GO:0000400	four-way junction DNA binding
GO:0051861	glycolipid binding
GO:0008201	heparin binding
GO:0000401	open form four-way junction DNA binding
GO:0042277	peptide binding
GO:0005515	protein binding
GO:0046983	protein dimerization activity
GO:0050786	RAGE receptor binding
GO:0003697	single-stranded DNA binding
GO:0008134	transcription factor binding

high mobility group box 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function