embryonic ectoderm development

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:59.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:71.10 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:6.79 cerebellum:7.09 brain stem:6.80 corpus callosum/glia:- pineal gland:- peripheral nerve:6.96 spine:- retina:- eye:6.41 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:8.17 thymus:8.48 bone marrow:6.84 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:- ovary:- testis:- heart:19.40 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:26.60        lung:152    bladder:- kidney:255.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:6.64 muscle:6.50 esophagus:- stomach:- intestine:8.04 colon:7.81 liver/hepato:- lung:- bladder:- kidney:6.21 pituitary:7.65 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001106278
Gene ID 293104
Unigene ID Rn.3939
Probe set ID rc_AA799481_at  [RG_U34A]
Ensembl ID ENSRNOG00000017509

Orthologous Gene

Human[3]  NM_003797, NM_152991
Mouse[1]  NM_021876, NM_152991

Chromosomal Region

1q32  [146,563,964  -  146,591,042]

Gene Family (Interpro ID)

IPR020472  G-protein beta WD-40 repeat, region
IPR001680  WD40 repeat
IPR019782  WD40 repeat 2
IPR019781  WD40 repeat, subgroup
IPR011046  WD40 repeat-like-containing domain
IPR017986  WD40-repeat-containing domain
IPR015943  WD40/YVTN repeat-like-containing domain

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0006349  genetic imprinting
GO:0016571  histone methylation

Cellular Component

GO:0035098  ESC/E(Z) complex
GO:0005634  nucleus
GO:0045120  pronucleus
GO:0001739  sex chromatin

Molecular Function

GO:0003682  chromatin binding
GO:0042054  histone methyltransferase activity
GO:0042802  identical protein binding