SRY (sex determining region Y)-box 6

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:82.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:13.30        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001024751
Gene ID 293165
Unigene ID Rn.76073
Probe set ID -
Ensembl ID ENSRNOG00000020514

Orthologous Gene

Human[4]  NM_001145811, NM_001145819, NM_017508, NM_033326
Mouse[6]  NM_001025559, NM_001025560, NM_011445, NM_033326

Chromosomal Region

1q34  [173,556,967  -  174,069,437]

Gene Family (Interpro ID)

IPR000910  High mobility group, HMG1/HMG2
IPR009071  High mobility group, superfamily

Link to Pubmed  (Pubmed ID)

10760285
12081133
12477932
15565366
15696967
15846364
16148004
19690046
21073445
22082260

Gene Ontology  (GO ID)

Biological Process

GO:0048708  astrocyte differentiation
GO:0035051  cardiac cell differentiation
GO:0051216  cartilage development
GO:0045165  cell fate commitment
GO:0000902  cell morphogenesis
GO:0048821  erythrocyte development
GO:0030218  erythrocyte differentiation
GO:0016458  gene silencing
GO:0030097  hemopoiesis
GO:0001701  in utero embryonic development
GO:0042692  muscle cell differentiation
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0021778  oligodendrocyte cell fate specification
GO:0048709  oligodendrocyte differentiation
GO:0032332  positive regulation of chondrocyte differentiation
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0009791  post-embryonic development
GO:0010468  regulation of gene expression
GO:0006355  regulation of transcription, DNA-dependent

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0044212  DNA regulatory region binding
GO:0046982  protein heterodimerization activity
GO:0043565  sequence-specific DNA binding
GO:0003700  transcription factor activity