TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor

 jump to detail

Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:59.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:35.50 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:147.20 bone:- skin:706.20
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:38 ovary:- testis:- heart:38.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:13.30        lung:50.70    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:14084.50
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID XM_001069140
Gene ID 294018
Unigene ID Rn.144813
Probe set ID -
Ensembl ID -

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

1q54  [252,391,049  -  252,406,534]

Gene Family (Interpro ID)

IPR020472  G-protein beta WD-40 repeat, region
IPR006594  LisH dimerisation motif
IPR015618  Transforming growth factor beta 3
IPR016319  Transforming growth factor-beta
IPR015615  Transforming growth factor-beta-related
IPR001680  WD40 repeat
IPR019782  WD40 repeat 2
IPR019781  WD40 repeat, subgroup
IPR011046  WD40 repeat-like-containing domain
IPR017986  WD40-repeat-containing domain
IPR015943  WD40/YVTN repeat-like-containing domain

Link to Pubmed  (Pubmed ID)

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0016573  histone acetylation
GO:0006352  transcription initiation
GO:0006367  transcription initiation from RNA polymerase II promoter

Cellular Component

GO:0015629  actin cytoskeleton
GO:0005575  cellular_component
GO:0043231  intracellular membrane-bounded organelle
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005669  transcription factor TFIID complex
GO:0033276  transcription factor TFTC complex

Molecular Function

GO:0003677  DNA binding
GO:0044212  DNA regulatory region binding
GO:0004402  histone acetyltransferase activity
GO:0003674  molecular_function
GO:0046983  protein dimerization activity
GO:0003700  transcription factor activity