protein tyrosine phosphatase, receptor type, M

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:155.50 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:357.10 vein:- lymphnode:- peripheral blood:- spleen:- thymus:122.90 bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.54 cerebellum:5.79 brain stem:6.01 corpus callosum/glia:- pineal gland:- peripheral nerve:6.01 spine:- retina:- eye:4.60 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:5.45 thymus:5.17 bone marrow:4.44 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:159.30 prostate:- ovary:114.10 testis:164.70 heart:19.40 muscle:- esophagus:- stomach:- intestine:104.70 colon:-     liver/hepato:13.30        lung:202.60    bladder:- kidney:127.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:5.54 muscle:5.52 esophagus:- stomach:- intestine:4.80 colon:5.02 liver/hepato:- lung:- bladder:- kidney:5.01 pituitary:5.74 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001168632
Gene ID 29616
Unigene ID Rn.205336
Probe set ID rc_AI639001_at  [RG_U34A]
Ensembl ID ENSRNOG00000011700

Orthologous Gene

Human[2]  NM_001105244, NM_002845
Mouse[1]  NM_008984, NM_002845

Chromosomal Region

9q37  [105,785,269  -  106,229,938]

Gene Family (Interpro ID)

IPR003961  Fibronectin, type III
IPR008957  Fibronectin, type III-like fold
IPR000242  Protein-tyrosine phosphatase, receptor/non-receptor type

Link to Pubmed  (Pubmed ID)

8989520

Gene Ontology  (GO ID)

Biological Process

GO:0007156  homophilic cell adhesion
GO:0016525  negative regulation of angiogenesis
GO:0010596  negative regulation of endothelial cell migration
GO:0001937  negative regulation of endothelial cell proliferation
GO:0031175  neuron projection development
GO:0045909  positive regulation of vasodilation
GO:0006470  protein amino acid dephosphorylation
GO:0042493  response to drug
GO:0010842  retina layer formation
GO:0031290  retinal ganglion cell axon guidance
GO:0007165  signal transduction

Cellular Component

GO:0005913  cell-cell adherens junction
GO:0005911  cell-cell junction
GO:0005737  cytoplasm
GO:0030027  lamellipodium
GO:0016020  membrane
GO:0048471  perinuclear region of cytoplasm

Molecular Function

GO:0045296  cadherin binding
GO:0004725  protein tyrosine phosphatase activity
GO:0005001  transmembrane receptor protein tyrosine phosphatase activity