leucine-rich repeats and calponin homology (CH) domain containing 4

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Synonym

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Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:83.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:73.70 spine:- retina:- eye:- artery/aorta:357.10 vein:- lymphnode:- peripheral blood:- spleen:234 thymus:- bone marrow:- adipose:- bone:78.10 skin:-
GeneChip cerebrum:7.82 cerebellum:7.54 brain stem:7.63 corpus callosum/glia:- pineal gland:- peripheral nerve:7.84 spine:- retina:- eye:8.07 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:7.40 thymus:7.32 bone marrow:7.43 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:227.70 ovary:- testis:82.30 heart:135.70 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:227.60 breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.46 muscle:7.50 esophagus:- stomach:- intestine:7.27 colon:7.21 liver/hepato:- lung:- bladder:- kidney:7.31 pituitary:7.73 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001127551
Gene ID 360779
Unigene ID Rn.24664
Probe set ID rc_AA892504_at  [RG_U34A]
Ensembl ID ENSRNOG00000001402

Orthologous Gene

Human[1]  NM_002319
Mouse[8]  NM_001168652, NM_146164

Chromosomal Region

12q12  [19,694,434  -  19,705,423]

Gene Family (Interpro ID)

IPR016146  Calponin-homology
IPR001715  Calponin-like actin-binding
IPR003096  SM22/calponin

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0045892  negative regulation of transcription, DNA-dependent

Cellular Component

GO:0005737  cytoplasm
GO:0016605  PML body