calcium channel, voltage-dependent, R type, alpha 1E subunit

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:12 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:357.10 vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:38 ovary:- testis:- heart:38.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:50.70    bladder:- kidney:63.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_019294
Gene ID 54234
Unigene ID Rn.107429
Probe set ID -
Ensembl ID ENSRNOG00000002863

Orthologous Gene

Human[1]  NM_000721, NM_001205293, NM_001205294
Mouse[1]  NM_009782, NM_001205293, NM_001205294

Chromosomal Region

13q21  [69,367,254  -  69,683,943]

Gene Family (Interpro ID)

IPR018249  EF-HAND 2
IPR002077  Voltage-dependent calcium channel, alpha-1 subunit
IPR005449  Voltage-dependent calcium channel, R-type, alpha-1 subunit
IPR003091  Voltage-dependent potassium channel

Link to Pubmed  (Pubmed ID)

8388125
9405717
9582423
10377343
11735114
12151091
12555202
12895521
14519849
16736476
17893194
20638246
21611731
21746798
22846999

Gene Ontology  (GO ID)

Biological Process

GO:0001662  behavioral fear response
GO:0048266  behavioral response to pain
GO:0070509  calcium ion import
GO:0070588  calcium ion transmembrane transport
GO:0006816  calcium ion transport
GO:0042596  fear response
GO:0042593  glucose homeostasis
GO:0007626  locomotory behavior
GO:0050877  neurological system process
GO:0002027  regulation of heart rate
GO:0048265  response to pain
GO:0019233  sensory perception of pain
GO:0030317  sperm motility
GO:0019226  transmission of nerve impulse
GO:0008542  visual learning

Cellular Component

GO:0043204  perikaryon
GO:0005891  voltage-gated calcium channel complex

Molecular Function

GO:0005509  calcium ion binding
GO:0008332  low voltage-gated calcium channel activity
GO:0047485  protein N-terminus binding
GO:0005245  voltage-gated calcium channel activity