high-mobility group (nonhistone chromosomal) protein 1-like 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:7.91 cerebellum:8.40 brain stem:7.35 corpus callosum/glia:- pineal gland:- peripheral nerve:7.92 spine:- retina:- eye:7.79 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:9.35 thymus:10.88 bone marrow:9.41 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:8.24 muscle:8.61 esophagus:- stomach:- intestine:9.24 colon:9.40 liver/hepato:- lung:- bladder:- kidney:9.08 pituitary:9.11 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001109373
Gene ID 679571
Unigene ID Rn.151172
Probe set ID M64986_at  [RG_U34A]
Ensembl ID ENSRNOG00000037945

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

19q12  [56,979,009  -  56,979,653]

Gene Family (Interpro ID)

IPR000910  High mobility group, HMG1/HMG2
IPR000135  High mobility group, HMG1/HMG2, subgroup
IPR009071  High mobility group, superfamily

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0006288  base-excision repair, DNA ligation
GO:0008150  biological_process
GO:0001654  eye development
GO:0002437  inflammatory response to antigenic stimulus
GO:0030324  lung development
GO:0017055  negative regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0043065  positive regulation of apoptosis
GO:0043280  positive regulation of caspase activity
GO:0043388  positive regulation of DNA binding
GO:0045819  positive regulation of glycogen catabolic process
GO:0045639  positive regulation of myeloid cell differentiation
GO:0001934  positive regulation of protein amino acid phosphorylation
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0051384  response to glucocorticoid stimulus
GO:0033151  V(D)J recombination

Cellular Component

GO:0009986  cell surface
GO:0005575  cellular_component
GO:0000793  condensed chromosome
GO:0005737  cytoplasm
GO:0005615  extracellular space
GO:0043005  neuron projection
GO:0005634  nucleus
GO:0017053  transcriptional repressor complex

Molecular Function

GO:0010858  calcium-dependent protein kinase regulator activity
GO:0005125  cytokine activity
GO:0008301  DNA bending activity
GO:0003677  DNA binding
GO:0003674  molecular_function
GO:0030295  protein kinase activator activity
GO:0003700  transcription factor activity
GO:0008134  transcription factor binding
GO:0070491  transcription repressor binding