contactin associated protein 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:191.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:36.90 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:8.85 cerebellum:9.39 brain stem:8.65 corpus callosum/glia:- pineal gland:- peripheral nerve:9.06 spine:- retina:- eye:8.08 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:8.06 thymus:7.93 bone marrow:7.92 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:113.90 ovary:- testis:- heart:58.20 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:127.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:8.12 muscle:8 esophagus:- stomach:- intestine:7.85 colon:7.82 liver/hepato:- lung:- bladder:- kidney:7.98 pituitary:8.37 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_032061
Gene ID 84008
Unigene ID Rn.88654
Probe set ID AF000114_at  [RG_U34A]
Ensembl ID ENSRNOG00000020277

Orthologous Gene

Human[1]  NM_003632
Mouse[1]  NM_016782

Chromosomal Region

10q32.1  [90,198,190  -  90,210,836]

Gene Family (Interpro ID)

IPR000421  Coagulation factor 5/8 type, C-terminal
IPR008985  Concanavalin A-like lectin/glucanase
IPR013320  Concanavalin A-like lectin/glucanase, subgroup
IPR001881  EGF-like calcium-binding
IPR000742  EGF-like, type 3
IPR008979  Galactose-binding domain-like
IPR001791  Laminin G
IPR012679  Laminin G, subdomain 1
IPR012680  Laminin G, subdomain 2

Link to Pubmed  (Pubmed ID)

8889548
9118959
9292722
9396755
10624965
11512672
11839274
12963709
14592966
19166515
19170162
21031018
22223644

Gene Ontology  (GO ID)

Biological Process

GO:0008088  axon cargo transport
GO:0007155  cell adhesion
GO:0007010  cytoskeleton organization
GO:0042552  myelination
GO:0050885  neuromuscular process controlling balance
GO:0050884  neuromuscular process controlling posture
GO:0031175  neuron projection development
GO:0048812  neuron projection morphogenesis
GO:0030913  paranodal junction assembly

Cellular Component

GO:0030424  axon
GO:0016021  integral to membrane
GO:0033270  paranode region of axon
GO:0008076  voltage-gated potassium channel complex

Molecular Function

GO:0005515  protein binding
GO:0017124  SH3 domain binding