synaptojanin 2

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:6.50 cerebellum:6.15 brain stem:6.37 corpus callosum/glia:- pineal gland:- peripheral nerve:6.41 spine:- retina:- eye:6.84 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:5.56 thymus:5.82 bone marrow:5.73 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:75.90 ovary:- testis:164.70 heart:- muscle:531.50 esophagus:- stomach:- intestine:- colon:289.90     liver/hepato:-        lung:50.70    bladder:- kidney:- pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:170.70 breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:6.28 muscle:6 esophagus:- stomach:- intestine:5.88 colon:6.86 liver/hepato:- lung:- bladder:- kidney:5.65 pituitary:6.05 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_032071
Gene ID 84018
Unigene ID Rn.10868
Probe set ID U90312_at  [RG_U34A]
Ensembl ID ENSRNOG00000017114

Orthologous Gene

Human[3]  NM_001178088, NM_003898
Mouse[15]  NM_001113351, NM_001113352, NM_001113353, NM_011523

Chromosomal Region

1q11  [40,763,793  -  40,824,351]

Gene Family (Interpro ID)

IPR005135  Endonuclease/exonuclease/phosphatase
IPR000300  Inositol polyphosphate related phosphatase
IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

8889548
9388224
9931483
10357812
11498538

Gene Ontology  (GO ID)

Biological Process

GO:0007420  brain development
GO:0016311  dephosphorylation
GO:0046855  inositol phosphate dephosphorylation
GO:0048312  intracellular distribution of mitochondria
GO:0046856  phosphoinositide dephosphorylation

Cellular Component

GO:0005737  cytoplasm
GO:0005881  cytoplasmic microtubule
GO:0031315  extrinsic to mitochondrial outer membrane
GO:0043679  nerve terminal
GO:0048471  perinuclear region of cytoplasm
GO:0032587  ruffle membrane

Molecular Function

GO:0004445  inositol-polyphosphate 5-phosphatase activity
GO:0003676  nucleic acid binding
GO:0000166  nucleotide binding
GO:0030165  PDZ domain binding
GO:0034593  phosphatidylinositol bisphosphate phosphatase activity
GO:0004439  phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0042578  phosphoric ester hydrolase activity
GO:0003723  RNA binding
GO:0017124  SH3 domain binding