transient receptor potential cation channel, subfamily C, member 4

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.40 cerebellum:5.14 brain stem:5.40 corpus callosum/glia:- pineal gland:- peripheral nerve:5 spine:- retina:- eye:5.37 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:5.29 thymus:5.18 bone marrow:5.34 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:19.40 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:5.15 muscle:5.09 esophagus:- stomach:- intestine:5.02 colon:5.03 liver/hepato:- lung:- bladder:- kidney:5.12 pituitary:5.36 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001083115
Gene ID 84494
Unigene ID Rn.108533
Probe set ID AB008889_at  [RG_U34A]
Ensembl ID ENSRNOG00000011133

Orthologous Gene

Human[9]  NM_001135955, NM_001135956, NM_001135957, NM_001135958, NM_003306, NM_016179
Mouse[2]  NM_016984, NM_001135956, NM_001135957, NM_001135958, NM_003306, NM_016179

Chromosomal Region

2q26  [143,350,286  -  143,485,716]

Gene Family (Interpro ID)

IPR004729  Transient receptor potential channel
IPR002153  Transient receptor potential protein

Link to Pubmed  (Pubmed ID)

9037541
10980202
11301024
11713258
12381092
17141310
17593972
17928298
18538797
20662729
22534489
22611033
23526217
23677990
23922735
24113457
24352411

Gene Ontology  (GO ID)

Biological Process

GO:0070509  calcium ion import
GO:0070588  calcium ion transmembrane transport
GO:0006816  calcium ion transport
GO:0014051  gamma-aminobutyric acid secretion
GO:0051924  regulation of calcium ion transport

Cellular Component

GO:0016323  basolateral plasma membrane
GO:0034704  calcium channel complex
GO:0005901  caveola
GO:0009986  cell surface
GO:0005911  cell-cell junction
GO:0030863  cortical cytoskeleton
GO:0005737  cytoplasm
GO:0016021  integral to membrane
GO:0005887  integral to plasma membrane
GO:0045121  membrane raft
GO:0005886  plasma membrane
GO:0043234  protein complex

Molecular Function

GO:0008013  beta-catenin binding
GO:0045296  cadherin binding
GO:0005262  calcium channel activity
GO:0070679  inositol 1,4,5 trisphosphate binding
GO:0015279  store-operated calcium channel activity